BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037A03SP1|AL430323
(866 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1437 1653 0.0
>3x_Contig1437
Length = 8480
Score = 1653 bits (833), Expect = 0.0
Identities = 864/870 (99%), Gaps = 4/870 (0%)
Strand = Plus / Minus
Query: 1 gatcttatttctaagcttccccttgatagaatccttccagaa-ccttgtttgtacc-agc 58
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 5492 gatcttatttctaagcttccccttgatagaatccttccagaaaccttgtttgtacccagc 5433
Query: 59 aatttatctaacgatttattattttgtaaaag-attcaattgttctttggataacagcgg 117
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5432 aatttatctaacgatttattattttgtaaaagcattcaattgttctttggataacagcgg 5373
Query: 118 ttgaatatgaacaatggctgtgtcgatcatttctaatgccgtagttgggtcgtctgtatg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5372 ttgaatatgaacaatggctgtgtcgatcatttctaatgccgtagttgggtcgtctgtatg 5313
Query: 178 gtcgtatttgtcgatggataagagtgtcagtgcaagagaacctaaganatgttgcatcga 237
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5312 gtcgtatttgtcgatggataagagtgtcagtgcaagagaacctaagaaatgttgcatcga 5253
Query: 238 gttaatctgacttgccaattgtagggagtcttgcactgacagctgcaacgatgtacaaac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5252 gttaatctgacttgccaattgtagggagtcttgcactgacagctgcaacgatgtacaaac 5193
Query: 298 attagagcaaccaatggacaatttcgcgtaas-attagcgactttagagagctcttgaat 356
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5192 attagagcaaccaatggacaatttcgcgtaagcattagcgactttagagagctcttgaat 5133
Query: 357 gtccgagtcctggaaactaagcaatttcgagtatttgtcatttgcatcgggatacaatct 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5132 gtccgagtcctggaaactaagcaatttcgagtatttgtcatttgcatcgggatacaatct 5073
Query: 417 ggttctcatcttcgatatcgtcaacagaaccatagataactgttgattcaactggtacaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5072 ggttctcatcttcgatatcgtcaacagaaccatagataactgttgattcaactggtacaa 5013
Query: 477 agagcagaattgattacactgcgataagattgaagttggtacgaacggaactgttgatac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5012 agagcagaattgattacactgcgataagattgaagttggtacgaacggaactgttgatac 4953
Query: 537 gaactgcaatattccaattgcctttttattataattggtggaagattgccattgttgaac 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4952 gaactgcaatattccaattgcctttttattataattggtggaagattgccattgttgaac 4893
Query: 597 atcaggggaagcagaaccataagcattctctctaatctgttgagccaattgctcaaaccc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4892 atcaggggaagcagaaccataagcattctctctaatctgttgagccaattgctcaaaccc 4833
Query: 657 gtgagagacattcaatgcagcgattgcaatttgagcagagaattctgattgatagcatga 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4832 gtgagagacattcaatgcagcgattgcaatttgagcagagaattctgattgatagcatga 4773
Query: 717 gttgtattgacaatatgccaacagtttgttcatgtactggaagttagcatcgataagttg 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4772 gttgtattgacaatatgccaacagtttgttcatgtactggaagttagcatcgataagttg 4713
Query: 777 agaatcggaagagggagatgcgttgcactgtgaccgtgaaatttctagctccgatggtag 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4712 agaatcggaagagggagatgcgttgcactgtgaccgtgaaatttctagctccgatggtag 4653
Query: 837 ttccgcagactgaatcgttggtaaggaatc 866
||||||||||||||||||||||||||||||
Sbjct: 4652 ttccgcagactgaatcgttggtaaggaatc 4623
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5932
Number of Sequences: 1807
Number of extensions: 5932
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 866
length of database: 10,358,551
effective HSP length: 16
effective length of query: 850
effective length of database: 10,329,639
effective search space: 8780193150
effective search space used: 8780193150
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)